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Last updated on 30. January 2020.Q:
How to generate a true positive rate table with the use of a confusion matrix in R
I am trying to generate a true positive rate (TPR) table with the use of a confusion matrix. The complete data frame is quite long and I shortened it here with a sample. I am trying to use the confusionmatrix function and compute the true positive rate with the following syntax
confusionMatrix(pred, p_A, p_F, p_N)
where pred is the vector of predicted values, p_A, p_F and p_N are the vectors of the actual values.
I also tried to compute the true positive rate like this
as.matrix(confusionMatrix(pred, p_A, p_F, p_N))[1,2]
but this leads to a matrix with a dimension that is too large.
Can someone give me a hint on how I can deal with the diagonal values that are “0.5” and how I can display the true positive rate table in R?
Thanks!
UPDATE: my data frame
wt1 wt2 wt3 wt4 wt5 wt6
1 1 1 1 1 1 1
2 1 1 1 1 1 1
3 1 1 1 1 1 1
4 1 1 1 1 1 1
5 1 1 1
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